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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs113008645 chr6:36015536 A/G 1.07E-9 406 15.63 15.13 6.15 KM Plot
LGG rs11311959 chr10:64002381 CT/C 0.000175 402 12.17 15.57 15.78 KM Plot
LGG rs113148965 chr14:74379013 CA/C 0 405 14.93 17.03 1.23 KM Plot
LGG rs113159942 chr7:55923629 A/T 0 401 15.25 15.65 3.77 KM Plot
LGG rs11316775 chr12:132607598 TA/T 0.00023 398 15.93 13.53 8.77 KM Plot
LGG rs113182977 chr8:49620434 G/A 6.66E-16 404 15.73 12.77 5.17 KM Plot
LGG rs113193726 chr7:64935317 G/A 9.18E-8 400 15.57 15.2 2.27 KM Plot
LGG rs11326070 chr16:72044923 CT/C 1.85E-8 407 15.2 16.73 6.63 KM Plot
LGG rs113289299 chr1:169641834 A/T 5.78E-11 399 15.17 17.93 5.93 KM Plot
LGG rs113365503 chr11:3000198 T/TA 0.000219 400 15.47 13.7 11.8 KM Plot
LGG rs113379066 chr5:156015359 T/C 1.98E-5 405 15.57 15.32 10.53 KM Plot
LGG rs113418976 chr7:55995701 T/C 1.53E-10 405 15.3 15.93 7.8 KM Plot
LGG rs11343685 chr5:156048529 TA/TAA 0.000223 388 16.75 14.15 11.17 KM Plot
LGG rs113439153 chr17:48526996 C/T 1.9E-5 404 15.17 19.1 14.12 KM Plot
LGG rs113439549 chr7:55964945 T/C 1.74E-10 405 15.2 15.93 7.8 KM Plot